Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 231 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 3e-28
 Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 24/209 (11%)

Query: 186 VALALAIAAIALMVRYANKRFNETGVPFHKF-WAGLLLFIAIPSLSVLL------FGSPV 238
           + LAL IA +  ++R +         PF    W G     +I ++ +L       FG+P 
Sbjct: 33  LVLALPIALVVALLRLS---------PFAPLRWLGFAYVESIRNIPLLAHMLFWYFGAPE 83

Query: 239 TWDMPQ-LKGFNFVGGWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSL 297
              +P+ +K + + G      E  +  +AL +YTAAF+AE +RSGIR++   Q EA R++
Sbjct: 84  L--LPEGIKQWLYAGHI----EAFSAVIALALYTAAFMAEDIRSGIRAIPTVQFEAGRAM 137

Query: 298 GLREGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQ 357
           G     T+R+V++PQALRV +PPL SQ L+L KN+S+A  IG  E++   AG V + T +
Sbjct: 138 GFSYLATMRRVVLPQALRVTVPPLISQTLSLWKNTSIATVIGVAELM-YQAGQVESATFR 196

Query: 358 AIEVIAITMSVYLAISISISLLMNWYNKR 386
           + E  A   + YL +S++I+ L  WY+ R
Sbjct: 197 SFESFAFASAAYLTVSLAITGLATWYHHR 225



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 28/73 (38%), Positives = 40/73 (54%)

Query: 79  YARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRNIPPLLQ 138
           Y  + V GLL +L +    ++LA  +  ++ + RLSP   +  L   YVE+ RNIP L  
Sbjct: 14  YHDMLVAGLLLSLQLLAAALVLALPIALVVALLRLSPFAPLRWLGFAYVESIRNIPLLAH 73

Query: 139 ILFWYFAVFLTLP 151
           +LFWYF     LP
Sbjct: 74  MLFWYFGAPELLP 86