Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 44/123 (35%), Positives = 78/123 (63%), Gaps = 3/123 (2%)

Query: 257 IPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQALRV 316
           I  + A TL L++Y  AF +EIVR GI S+ +GQ EAAR+LG+     +R++++PQA + 
Sbjct: 130 ISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQVEAARALGMTRMQLMRRIVLPQAFKR 189

Query: 317 IIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVL-NQTGQAIEVIAITMSVYLAISIS 375
           ++PPL SQ +   KN+SL + +  P++  L+ G V+ ++T + +E+       Y A+ + 
Sbjct: 190 MVPPLMSQSIMQLKNTSLLSVLAVPDL--LYQGQVIAHETYRPLELYTFIAVAYFAVLLP 247

Query: 376 ISL 378
           +++
Sbjct: 248 VTI 250



 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 28/69 (40%), Positives = 44/69 (63%)

Query: 78  SYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRNIPPLL 137
           SY R+ +IGL  TL+ T + V+L   +G I G+ RLS N  I+     Y+E FR  P L+
Sbjct: 54  SYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIEVFRCTPVLV 113

Query: 138 QILFWYFAV 146
           Q++++Y+A+
Sbjct: 114 QLVWFYYAL 122