Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 369 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM from Variovorax sp. SCN45

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 9/172 (5%)

Query: 219 GLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVGGWVLIPELLALTLALTIYTAAFIAEI 278
           G + FI    L  LLF S V   +   +GF+       I +LL   +A+ ++ AA+IAEI
Sbjct: 196 GYIEFIRGVPLISLLFMSSVMLPLFLPEGFS-------IDKLLRAQIAIIMFAAAYIAEI 248

Query: 279 VRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGI 338
           VR G++S+  GQ E A S+GL     +RKVI+PQAL+V+IPPL S ++ L K++SL   I
Sbjct: 249 VRGGLQSIPKGQYEGADSIGLSYWQQMRKVIVPQALKVVIPPLVSTFIALFKDTSLVVII 308

Query: 339 GYPEMVSLFAGTVLNQ--TGQAIEVIAITMSVYLAISISISLLMNWYNKRIA 388
           G  ++       + +   +G  +E       +Y A    IS   +   + +A
Sbjct: 309 GIFDLTQSAKAALADPAWSGFGVEAYLFIGLIYFAFCYCISKYSSTLERSLA 360



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 86  GLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRNIPPLLQILFWYFA 145
           GL  TL+++  G+  A   G  + + R S    I  +   Y+E  R + PL+ +LF   +
Sbjct: 157 GLPLTLMLSVFGIAFAFPFGVCLALGRRSRMPAIKAICVGYIEFIRGV-PLISLLF-MSS 214

Query: 146 VFLTLPGPRG 155
           V L L  P G
Sbjct: 215 VMLPLFLPEG 224