Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 337 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Xanthobacter sp. DMC5

 Score =  380 bits (975), Expect = e-110
 Identities = 188/340 (55%), Positives = 248/340 (72%), Gaps = 4/340 (1%)

Query: 4   LKTTLAVLTAAA-ALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62
           +KT LA++  AA ALGA  TA    TL  VK +G + CGVS GLPGFS  DA GK  G D
Sbjct: 1   MKTILALMAGAALALGA--TAATAQTLKTVKDRGELVCGVSKGLPGFSAQDASGKWTGFD 58

Query: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122
            DVC+A+AAA+F DA KVK+  L A ERF AL  G++DVLSRN+TWT  R+A +GL+F  
Sbjct: 59  VDVCKALAAAIFDDANKVKYVPLTADERFPALTKGDIDVLSRNSTWTLEREAKLGLLFTA 118

Query: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182
           + YYDG GFLV     V+SA ELD + +C+QAGTT E N  D+F ANG+    +T  TS 
Sbjct: 119 INYYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAESNTKDYFAANGMTLELVTLPTSG 178

Query: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242
           E  K+ + G+CD LT+D SQL+A R  +A P +++VLP+ ISKEPLGPVVR+GD++WF++
Sbjct: 179 ELVKAYDEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNL 238

Query: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIVKQ 302
           VKWT++AM+NAEE G+ +  ++A  K+ K P+V RL+G +G YG++L + KD+VV+IVK 
Sbjct: 239 VKWTVYAMINAEELGVATNTLDAAIKSQK-PEVKRLVGNEGNYGEELGVTKDFVVRIVKA 297

Query: 303 VGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342
           VGNYGE FE+N+G ++ L I RG+N LW+ GGIQYAPPVR
Sbjct: 298 VGNYGESFERNVGAASKLGIPRGINQLWSMGGIQYAPPVR 337