Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 336 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Xanthobacter sp. DMC5

 Score =  414 bits (1064), Expect = e-120
 Identities = 200/334 (59%), Positives = 254/334 (76%), Gaps = 2/334 (0%)

Query: 10  VLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAV 69
           +L AAA L +++ A   ATLD VK +G + CGV+ GLPGFS P+ + +  G+D D CRA+
Sbjct: 4   ILLAAAGLLSLAGAVQAATLDDVKARGALNCGVTQGLPGFSSPNDKNEWSGLDVDFCRAI 63

Query: 70  AAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGV 129
           AA +F D TKVKF+ L+AK+RFTAL SG +DVLSRNTTWT SRD  +G  FAGV YYDG 
Sbjct: 64  AAGIFNDPTKVKFTPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVMYYDGQ 123

Query: 130 GFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTP-ITFDTSDESAKSL 188
           GFL+ K +G+ SAKEL  A+IC+Q GT+ ELNV D+FRAN +KY   I F T DE+ K+ 
Sbjct: 124 GFLIRKSVGLKSAKELQEASICVQTGTSNELNVGDYFRANNMKYREVIAFATLDETVKAY 183

Query: 189 ESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIVKWTLF 248
           ESGRCDV TSDKSQL A R KL  P ++V+LPETISKEPLGP+VR GD++WF +VKWT F
Sbjct: 184 ESGRCDVFTSDKSQLAAVRLKLTNPADHVLLPETISKEPLGPLVRHGDDQWFDLVKWTYF 243

Query: 249 AMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIVKQVGNYGE 308
           A+LN+EE GIT KNV+   K ++NPD+ RLLG DG+YG+ + L  DWVV+I+K  GNYGE
Sbjct: 244 ALLNSEELGITQKNVDEMVK-SENPDIKRLLGTDGKYGEGIGLTPDWVVRIIKATGNYGE 302

Query: 309 VFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342
           ++++N+G +T L I+RG+N LW  GGIQY PPVR
Sbjct: 303 IYDRNVGPATPLGIERGLNNLWTKGGIQYGPPVR 336