Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 266 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 15/232 (6%)

Query: 9   AVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRA 68
           A+L +A AL  +  AQAGA  DAV++ G ++ G +     F + D QG+IVG + D+   
Sbjct: 8   ALLLSAVALIHMGLAQAGAIDDAVRR-GVLKVGTTPTYVPFEMTDKQGRIVGFEIDLLNV 66

Query: 69  VAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDG 128
           ++ A+     +++   +   E    LQ+   D++    T T  R+  + L F+      G
Sbjct: 67  MSQAL---GVELEMVSMPYTELVAGLQAKSFDLIGSGMTVTQERN--LKLNFSDSFIVVG 121

Query: 129 VGFLVNKKLG--VSSAKELDGAT--ICIQAGTTTELNVSDFFRANGLKYTPITFDTSDES 184
              L++ +L   V+S ++LD A+  I    GTT E     F  A  +     +F T +E 
Sbjct: 122 QSVLLHPRLAGKVASVEDLDDASYQIATTEGTTGEAAARRFLGAARIS----SFSTPEEG 177

Query: 185 AKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGD 236
            + +  G+ D    D        S+    T  + L +  + EPL   V+KGD
Sbjct: 178 VRQVVQGKADAFIHDAPYNLIALSRPENAT-LLALEQPFTFEPLAFGVKKGD 228