Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 10/217 (4%)

Query: 23  AQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCRAVAAAVFGDATKVKF 82
           A A + +D +K +  +  GV    P F   +  G+ VG D D+ R  A  + GD  KV+F
Sbjct: 29  AAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEF 88

Query: 83  SQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYYDGVGFLVNKKLGVSSA 142
             +    R   LQS +VD++  N T T  R   +   F        V  LV     V S 
Sbjct: 89  VAVEPASRIPFLQSDKVDLILANMTVTPERKEAVD--FTNPNLKVAVQALVPNDSAVKSL 146

Query: 143 KELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDKSQ 202
            +L   T  +  GTT ++    +   N   +  + F+ + ES ++L +GR D    D   
Sbjct: 147 NDLATRTTIVTTGTTADI----WLTKNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLV 202

Query: 203 LFAQRSKLAAPTEYVVLPETISKE-PLGPVVRKGDEE 238
           LF+   +      Y VL E +  E P+ P V+KG+ E
Sbjct: 203 LFSWAKQNPG---YRVLEEKLGDEAPIAPAVKKGNIE 236