Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 296 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 6/257 (2%)

Query: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62
           M  + L    AAA L A + AQA  TL  + + G +     +    FS  +  GK +G  
Sbjct: 1   MKSSVLMASMAAAVLLAATGAQAADTLAKIAESGKITLAYRESSVPFSYLEGPGKPIGFS 60

Query: 63  ADVCRAVAAAVFGDATK----VKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGL 118
            ++  AV  AV     K    V    + ++ R   + +G +D+   +TT  ++R  G  +
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLITNGTIDLECGSTTNNTAR--GKDV 118

Query: 119 VFAGVTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITF 178
            FA   +Y G   LV K   +    +L   T+    GTT  L +  +     L    +  
Sbjct: 119 AFAINHFYTGTRLLVKKSSKIKDYADLAKKTVASTTGTTNVLVMRKYNIEKNLGMNIVLG 178

Query: 179 DTSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEE 238
               +S   LES R      D   LF   +    P+++ V+ E++  EP   ++ K D  
Sbjct: 179 KDHADSFLLLESDRAAAFAMDDILLFGLIANAKTPSDFEVVGESLQVEPYACMLPKDDPA 238

Query: 239 WFSIVKWTLFAMLNAEE 255
           +  +V  T  AM+ + E
Sbjct: 239 FKKVVDDTFAAMMKSGE 255