Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 12/251 (4%)

Query: 8   LAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGV-SDGLPGFSVPDAQGKIVGIDADVC 66
           +A   AA+AL   + A A    D +KKKG +  GV     P   +     +IVG + D+ 
Sbjct: 6   IAAAAAASALLLGTVAHADQLAD-IKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLV 64

Query: 67  RAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYY 126
            A+A  +     K    Q+    R   LQ G VD+++   T    R+A +   F+  T+ 
Sbjct: 65  NAIAKKI---GVKPVLKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQID--FSLTTFV 119

Query: 127 DGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAK 186
            G   +V K  G++   +L G  +    G T E N+    R        +TFDTS ++ +
Sbjct: 120 TGQKAIVKKDSGITEVPQLAGKKVLTIRGGTQEPNI----RKAVPNVDVVTFDTSQQAFQ 175

Query: 187 SLESGRCDVLTSDKSQLFAQRSKLAAP-TEYVVLPETISKEPLGPVVRKGDEEWFSIVKW 245
           +L+ G+      D++ L    +KL     +YVVL + +S E L   ++KG+    ++V  
Sbjct: 176 ALQQGKGVGYVDDEAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGETALKAVVDD 235

Query: 246 TLFAMLNAEEA 256
           TL  +  + EA
Sbjct: 236 TLRELEKSGEA 246