Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 302 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 5/239 (2%)

Query: 8   LAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVCR 67
           LA +T A A  A    +   TL   +  G +  G  +    FS  + + + +G   ++CR
Sbjct: 15  LATVTLATAAVAAQAQELIGTLAKARASGTIAIGYRESSVPFSFLNTRKEPIGYSIELCR 74

Query: 68  AVAAAVFGDATK---VKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVT 124
           ++ +A+     K   +++  + +  R  A+ SG+VD+   +TT    R   +   F+   
Sbjct: 75  SLVSAIEDAVNKSLAIQWVPVTSDSRIDAVVSGKVDLECGSTTNNLERQKRVS--FSPTM 132

Query: 125 YYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDES 184
           +  G   LV K   + S ++L G  + + AGTT E  + D      L    +      ES
Sbjct: 133 FVSGTKVLVRKGSPIKSFRDLAGRKVAVTAGTTNEKTLRDLSAKFKLGIDLLVARDHAES 192

Query: 185 AKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIV 243
              ++SG+ D   +D   L+   ++ AA  +Y V+ + +S +P G + RK D +   +V
Sbjct: 193 FGLVKSGQADAFATDDVLLYGLIAQDAAKADYEVVGDFLSYDPYGIMYRKDDPQLNKVV 251