Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 298 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 5/252 (1%)

Query: 5   KTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQG-KIVGIDA 63
           KT  AV   A A GA +    G TLD +K  G V  GV +  P  +     G K VG   
Sbjct: 6   KTAAAVALLALAFGAAAQTATG-TLDKIKTSGKVVLGVREASPPMAYMLGAGEKYVGYHV 64

Query: 64  DVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGV 123
           ++C  V   +   A K+++  + A+     +Q+G +D+    TT   +R     + FA  
Sbjct: 65  ELCERVLKDIAPQA-KLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNMARQ--QLVAFALT 121

Query: 124 TYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDE 183
           TY   V        G+++  +L G  +    GTT    +    R+N + Y  +      E
Sbjct: 122 TYVSEVRMATKVDSGITTLDQLAGRNVSASTGTTAVQLLRKRERSNNVSYKTVLGKDHLE 181

Query: 184 SAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSIV 243
           S   LESGR D    D + L    +    P  Y ++ E +  EP+  + RK D  + + V
Sbjct: 182 SFLQLESGRADAFVLDDNLLAGIIANSKDPASYRIVGEALGSEPIALLFRKDDPAFKTAV 241

Query: 244 KWTLFAMLNAEE 255
             +L  M+ + E
Sbjct: 242 DDSLRRMMKSGE 253