Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 298 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 6/236 (2%)

Query: 4   LKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDA 63
           +K  L  L   A +   + AQA  TL  +K++G V  GV D   G +     GK VG   
Sbjct: 1   MKKQLLALAVTAFVATGAFAQATDTLAKIKERGAVNLGVRDS-SGLAYTLGGGKYVGFHT 59

Query: 64  DVCRAVAAAV---FGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVF 120
           ++   +   +    G   K+ +  + ++ R   +Q+G +D    +TT  ++R   +   F
Sbjct: 60  EMAERIIDDLSKDVGKPLKIDYQVITSQNRVPLVQNGTIDFECGSTTNNTARQKDVD--F 117

Query: 121 AGVTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDT 180
           A  TY + V  L     G++   +L G  +    GTT+   +    RA GL +  +    
Sbjct: 118 AYTTYVEEVRILTKANSGINGIADLKGKVVATTTGTTSVQTLRKNKRAEGLDFKEVMGKD 177

Query: 181 SDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGD 236
             +S   LESGR D    D S L A  +K   P ++ ++ E +S EP+  ++ KGD
Sbjct: 178 HADSFLLLESGRADAFVMDGSILAANAAKSKNPKDFKMVGEVLSVEPIACMLPKGD 233