Pairwise Alignments

Query, 342 a.a., putative amino-acid ABC transporter-binding protein YhdW from Pseudomonas putida KT2440

Subject, 345 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  363 bits (933), Expect = e-105
 Identities = 181/337 (53%), Positives = 239/337 (70%), Gaps = 3/337 (0%)

Query: 9   AVLTAAA--ALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGIDADVC 66
           A+L AA+  A  A + A AG TLDAVK++G V+CGV++G+ GFS PD QG   G+D D C
Sbjct: 9   ALLAAASVIAFAAAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTC 68

Query: 67  RAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAGVTYY 126
           RA+AAAV GD  KV F  LN+++RF+ALQ+GE+D+L+RNTTWT +RDA +G  F  +TYY
Sbjct: 69  RAIAAAVLGDGKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYY 128

Query: 127 DGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAK 186
           DG GFLV KKL V+SAK+L  ATIC Q+GTT E NVSD+FRA G+    + F++ + S K
Sbjct: 129 DGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQGIPVKTVVFESFEASFK 188

Query: 187 SLESGRCDVLTSDKSQLFAQRSKLAA-PTEYVVLPETISKEPLGPVVRKGDEEWFSIVKW 245
           +  SGRC   T+D S L   R+K A  P +YV+LPE ISKEPL P+VR+GD+EWF+I KW
Sbjct: 189 AFFSGRCQAFTTDASALAGLRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKW 248

Query: 246 TLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGADGEYGKDLKLPKDWVVQIVKQVGN 305
              A++ AEEAG+T  N +     +K+P   RL+G   + GK L L K+W  + +K VGN
Sbjct: 249 VPNALIEAEEAGVTQANADELKANSKDPAQQRLVGTGEDLGKLLGLDKEWSFRAIKAVGN 308

Query: 306 YGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342
           YGE+FE+N+G  + LK+ RG N LW+ GG+ YAPPVR
Sbjct: 309 YGEMFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 345