Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 532 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  281 bits (718), Expect = 5e-80
 Identities = 158/373 (42%), Positives = 223/373 (59%), Gaps = 10/373 (2%)

Query: 93  FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 152
           F +  LS++++ A+ D G+   TPIQAQ + + L  +D +G AQTGTGKTAAF + +++ 
Sbjct: 3   FSELGLSDKVLAAVADTGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPMLTL 62

Query: 153 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 212
           L+Q           PR LI+ PTREL  Q+ ++     KY+ LNV   +GG+ F  Q   
Sbjct: 63  LEQGRARARM----PRTLILEPTRELAAQVEENFTRYGKYSKLNVALLIGGVSFGDQDTK 118

Query: 213 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPK 272
           L  R  D+L+ATPGRLLD  +RG + L  +EV+V+DEADRMLDMGFIP + +I +  P  
Sbjct: 119 L-VRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVP-- 175

Query: 273 SERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSD--KYKLL 330
             RQTL FSAT   ++  L  Q+ ++P  VE+      + TV Q + A    D  K ++L
Sbjct: 176 FTRQTLFFSATMPPEIQRLVSQFLSSPVRVEVSKPASTATTVTQELVASGREDYEKREVL 235

Query: 331 YNLVTQ-NKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGR 389
             L+      +  ++F NRK +V  +   L + G NA  L GD+ QH RI+ L+ FR G 
Sbjct: 236 RELIRSCENLQNGIIFCNRKRDVAVLHRSLQKHGFNAVALHGDMDQHARIKALDEFRNGE 295

Query: 390 ITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSY 449
            T+LVA+DVA RG+ I  +SHV N+ +P   +DYVHRIGRTGRAG +G + +     D+ 
Sbjct: 296 ATLLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRAGTAYTMVTHLDAK 355

Query: 450 QLPAIEALLGRKI 462
            L AIE L+G  I
Sbjct: 356 SLSAIEKLIGNPI 368