Pairwise Alignments

Query, 480 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas putida KT2440

Subject, 503 a.a., ATP-dependent RNA helicase from Agrobacterium fabrum C58

 Score =  276 bits (707), Expect = 9e-79
 Identities = 158/377 (41%), Positives = 228/377 (60%), Gaps = 11/377 (2%)

Query: 91  TRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISII 150
           T F D  LS +++ AI D G+   TPIQA  +   L  +D  G AQTGTGKTA+F++ ++
Sbjct: 2   TTFSDLGLSQKVLSAIADAGYTTPTPIQAGAIPPALEKRDICGIAQTGTGKTASFVLPML 61

Query: 151 SQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQL 210
           + L++           PR LI+ PTREL  Q+A++     K   LNV   +GG+ F+ Q 
Sbjct: 62  TLLEKGRARARM----PRTLILEPTRELAAQVAENFEKYGKNHKLNVALLIGGVSFEDQD 117

Query: 211 KALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTP 270
           + LE R  D+L+ TPGRLLD  +RG++ +  VE++V+DEADRMLDMGFIP + +I +  P
Sbjct: 118 RKLE-RGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKMIP 176

Query: 271 PKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSD--KYK 328
               RQTL FSAT   ++  LA ++  NP  +E+   +  ++TV Q + A    D  K  
Sbjct: 177 --FTRQTLFFSATMPPEIQKLADRFLQNPTRIEVAKPSSTAKTVTQRIVAAHNKDYEKRA 234

Query: 329 LLYNLVTQNKWE--RVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFR 386
           +L +LV   + E    ++F NRK +V  +   L R G +   L GD+ Q  R   L++FR
Sbjct: 235 VLRDLVRAEEAELKNAIIFCNRKKDVADLFRSLDRHGFSVGALHGDMDQRSRTTMLQNFR 294

Query: 387 EGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGED 446
           +G++T+LVA+DVA RG+ I  +SHV NF +P   +DYVHRIGRTGRAG SG + +   + 
Sbjct: 295 DGQLTLLVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTLVTKS 354

Query: 447 DSYQLPAIEALLGRKIK 463
           D+  L AIE L+  KI+
Sbjct: 355 DAKYLDAIEKLIAEKIE 371