Pairwise Alignments

Query, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  239 bits (610), Expect = 2e-67
 Identities = 148/468 (31%), Positives = 245/468 (52%), Gaps = 5/468 (1%)

Query: 6   RLSPLL-LAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDA 64
           +L+P + LA+LL+ C +GPD+QRP+   P Q+   QG   A+ P        WWE + D 
Sbjct: 42  KLAPTMGLALLLSACAIGPDYQRPEVVEPAQFKEAQGWRQAT-PSDSLARGAWWELYGDR 100

Query: 65  RLSALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDP 124
           +L+ L+ R+   N  +  A AR  Q++AL  +      P+VD++ G +RA       +  
Sbjct: 101 QLNDLVMRLNTANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRASQGTGSSNAS 160

Query: 125 SGKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGN 184
              +     +     L   WE D+WG++RR +EA +A+ E +  D   + L+  SE   +
Sbjct: 161 LSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQS 220

Query: 185 YIQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLE 244
           Y+QLR +     + Q  L   + SL++++++   GV+ +  VAQA  Q+ + ++ L  L 
Sbjct: 221 YLQLRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLI 280

Query: 245 AQRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARL 304
            QR  L NA+++L  E P +    L    ++PA  Q   + LPS+L ERRPDI  AE  +
Sbjct: 281 WQRAQLENAIAVLIGEAPANF--NLAVSKDIPALPQ-IPVSLPSQLLERRPDIASAERSV 337

Query: 305 HAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKG 364
            AA A+IGVAKA +YP + LS + G+ +   +D+    +R ++ GP++++ +F+GG+   
Sbjct: 338 IAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSA 397

Query: 365 TLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQR 424
            ++   A   E    YR+ VL  + E+++ +      +       EA+   R +L   Q 
Sbjct: 398 EVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLRLTQN 457

Query: 425 QYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGW 472
           QY  G + +L+V+TVQ   L++E   +        A V L  ALGGGW
Sbjct: 458 QYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGGGW 505