Pairwise Alignments

Query, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

Subject, 440 a.a., Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA from Variovorax sp. SCN45

 Score =  174 bits (440), Expect = 5e-48
 Identities = 107/346 (30%), Positives = 184/346 (53%), Gaps = 11/346 (3%)

Query: 17  NNRKTLFIGSVLAVAVLAGIVGPW----MFGSDHRQSTNDAYVTADYTVVAPKVAGFIKQ 72
           N ++   + ++ AV ++AG  G W       + H + T++AYV+ +   + P++ G +  
Sbjct: 24  NGKRRRALTALAAVVIVAG--GGWGLYEWLVASHYEDTDNAYVSGNVIQITPQIGGTVMS 81

Query: 73  VLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLERQDALIAQAEA 132
           +  +D   V AGQ L  +D  D + AL+ A+A L  A  Q     A      A +   ++
Sbjct: 82  INADDTDFVKAGQPLVQLDPADAKVALEQAEAALAQAVRQVRTLYANNGSLAAQVTLRQS 141

Query: 133 AVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQAARVAARKQ 192
            +  AQ+++A A  ++ R   L+  GA + +    A +A+D A+++LA AQA  +AA++ 
Sbjct: 142 DIVKAQSDIAKAQDDLQRRRALSGNGAVSKEELNHAETALDTAKSQLAAAQAGVIAAKEA 201

Query: 193 V----DILTAQVASADGQLKRAEAGLEKAQLDLSYTRITAPVDGMVGERALRVGAYVNPG 248
           +     +      +    +  A A + +A L      + APVDG V +R +++G  V  G
Sbjct: 202 LVSNQSLTEGTSVAQHPSVLAAAAKVREAYLATQRVAMPAPVDGYVAKRTVQLGQRVAAG 261

Query: 249 ARLLSVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTFSGET-LQGHVQSIAPATGVTF 307
             ++S+VPL Q +V  NF+E QL +++  QPV+++ D +  +    G V  +   TG  F
Sbjct: 262 TPMMSIVPLNQLWVDANFKEVQLRNIRIDQPVKLTADVYGKKVEYTGKVAGLGVGTGSAF 321

Query: 308 AAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMSVEATID 353
           A +   NATGN+ KVVQR+PV+I LD  Q     LR+G+S++A +D
Sbjct: 322 ALLPAQNATGNWIKVVQRVPVRIALDPEQLKANPLRIGLSMDAEVD 367