Pairwise Alignments

Query, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  178 bits (452), Expect = 2e-49
 Identities = 125/348 (35%), Positives = 183/348 (52%), Gaps = 24/348 (6%)

Query: 14  EMTNNRKTLFIGSVLAVAVLAGIVGPWMFGS---DHRQSTNDAYVTADYTVVAPKVAGFI 70
           E +  RK   +G +L + +LAG VG W + S      +ST+DAYV  +   + P VAG +
Sbjct: 15  EPSRKRKAWLLG-LLLLLILAG-VGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTV 72

Query: 71  KQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLERQDALIAQA 130
             +  +D   V AGQ+L   D  D + AL +A+A+L  +  Q    R      D+L AQ 
Sbjct: 73  TSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQ---VRGLYSNVDSLKAQL 129

Query: 131 EAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQAARVAAR 190
           E      QAE+  A  + NR   LA+ GA        A   +  AR  L+ AQAA  +AR
Sbjct: 130 ETR----QAELRKAQQDFNRRKVLADSGA-------IAAEELSHARDDLSVAQAAVNSAR 178

Query: 191 KQVDILTA----QVASADGQLKRAEAGLEKAQLDLSYTRITAPVDGMVGERALRVGAYVN 246
           +Q+   +A     V S+   +  A A L +A LD + T + APV G V +R +++G  + 
Sbjct: 179 QQLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQ 238

Query: 247 PGARLLSVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTFSGET-LQGHVQSIAPATGV 305
           PG   ++V+PL Q ++  NF+ETQL  ++ GQPV I+ D +  E    G V S+   TG 
Sbjct: 239 PGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGS 298

Query: 306 TFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMSVEATID 353
            FA +   NATGN+ K+VQR+PV+I L   Q     LR+G+S    +D
Sbjct: 299 AFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVD 346