Pairwise Alignments

Query, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

Subject, 508 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Sphingobium sp. HT1-2

 Score =  125 bits (314), Expect = 4e-33
 Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 19/413 (4%)

Query: 33  LFGVLLAV--LCAGLNESVTKISLADIRGAMGIGADEGAWLLAVYSAASVSAMAFAPWLA 90
           L G++LA+      L+ ++  +S+  I G +GI  D+G W++  Y+ A    +    WLA
Sbjct: 17  LAGLVLALSNFMVVLDLTIANVSVPHIAGNLGISGDQGTWIITSYAVAEAICVPLTGWLA 76

Query: 91  TTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGFAAGALPPMLMSVALRFLPP 150
             F + R  + A+  F    ++   +  L  ++  R+ QG   G + PM  ++ LR  PP
Sbjct: 77  LRFGVVRTFIWAMIGFGFFSMMCGLSTTLGMIVAARLGQGICGGPIMPMSQTLLLRIFPP 136

Query: 151 GIKVYGLACYALTATFGPNLGTPLAGLWTEYVGWQWAFWQIILPSLLAMVCVGWGLPQ-D 209
            ++   +  +A+T   GP +G  + G  ++   W W F+ I LP  +A +CV   +    
Sbjct: 137 EMRPRAMGLWAMTTLLGPAMGPIVGGYISDNWSWHWIFF-INLP--IAALCVFAAMAMLR 193

Query: 210 PLRLERFKQ-FDWRGVLLGLPAISCTVLGLSLGDRWGWFDSPLICWLLGGGLLLLVLFMY 268
           P+  +   Q  D  G+ L +  I C  + L +G    WF  PLI  L     +  ++F+ 
Sbjct: 194 PVETDTAHQPIDKIGLCLLIFWIGCLQVMLDIGRDHDWFSDPLILTLAILAGIGFIVFII 253

Query: 269 NEWSEPLPFFQLRLLQRRNLSFALVTLAGVL-VVLSGVGSIPSAYLAQIQGYRPAQTSPL 327
            E +E  P   LR+ +    S  + TLA       S +  IP  +L    GY    +  +
Sbjct: 254 WELTEEHPIVDLRVFRHIGFSSGVFTLALAFGAYFSSIVVIPQ-WLQMSMGYTATWSGIV 312

Query: 328 MMLVAMPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAVSCVGSSLLTSEWIRG-DFYPF 386
               AM  +++ P  A       VD R  + I  A+  + C+  +L  + W  G DF+  
Sbjct: 313 TAFTAMAAVMSAPFAARFTG--KVDPR--IMISGAVFWLGCM--TLWRAHWTSGIDFFGL 366

Query: 387 YL---LQVFGQPMAVLPLLMLSTNGMTPQEGPFASSWFNTVKGLAAVIAGGLL 436
            L   +Q F  P  ++PL  L+   + P E   A+   N ++ +A  IA  L+
Sbjct: 367 ALPQFVQGFAMPFFMIPLTTLTLGSVPPSETASAAGLQNFLRTMAIAIATSLV 419