Pairwise Alignments

Query, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 2e-34
 Identities = 112/486 (23%), Positives = 202/486 (41%), Gaps = 29/486 (5%)

Query: 35  GVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWLLAVYSAASVSAMAFAPWLATTFS 94
           G+ LA     L+ ++  ++L  I G +G+  ++G W++  ++ ++  A+    WL+  F 
Sbjct: 20  GLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFG 79

Query: 95  LRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGFAAGALPPMLMSVALRFLPPGIKV 154
             +  + A  LF +   L   A ++  L+  RVLQG  AG L PM  ++ +   PP  + 
Sbjct: 80  EVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRG 139

Query: 155 YGLACYALTATFGPNLGTPLAGLWTEYVGWQWAFWQIILPSLLAMVCVGWGLPQDPLRLE 214
             LA  A+     P  G  L G  T+   W W F+  +   L A   V   +   P+   
Sbjct: 140 MALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTS 199

Query: 215 RFKQFDWRGVLLGLPAISCTVLGLSLGDRWGWFDSPLICWLLGG--GLLLLVLFMYNEWS 272
           R +  D+ G+L  +  +    + L  G+   WF+S  I  ++G    ++ L +F+  E +
Sbjct: 200 R-QPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFI--IVGSLISVVFLAVFVIWELT 256

Query: 273 EPLPFFQLRLLQRRNLSFALVTLAGVLVVLSGVGSIPSAYLAQIQGYRPAQTSPLMMLVA 332
           +  P   LRL   RN     + L G      G+  I   +L    GY        +  + 
Sbjct: 257 DRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIG 316

Query: 333 MPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAVSCVGSSLLTSEWIRGDFYPFYLLQVF 392
           +  +I  P      +    D R + G+    +  SC   +  TSE    DF    L+Q+F
Sbjct: 317 LLPVIMSPFVGKYAH--RFDLRVLAGLAFLAIGTSCYMRAGFTSE---VDFQHVALVQLF 371

Query: 393 ---GQPMAVLPLLMLSTNGMTPQEGPFASSWFNTVKGLAAVIAGGLLDVLGTLRRHFH-- 447
              G  +  +P L +  + + P +    S     ++ L    A  L   +   R   H  
Sbjct: 372 MGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHA 431

Query: 448 ------------SNHLVDSLGNAPLVDGNAAGLAKRIHDQAQVLTSADLYLVLACIAVAL 495
                       + H ++ LG A     + A L + ++ QA ++++ D + +++ +   L
Sbjct: 432 YLSEHISQFDPTTRHTLEQLGGAS--PQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489

Query: 496 ICLIPF 501
           I L+ F
Sbjct: 490 ILLVWF 495