Pairwise Alignments

Query, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

Subject, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Serratia liquefaciens MT49

 Score =  113 bits (282), Expect = 2e-29
 Identities = 97/436 (22%), Positives = 173/436 (39%), Gaps = 18/436 (4%)

Query: 26  GLQVVVGLFGVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWLLAVYSAASVSAMAF 85
           G Q+      + LA     L+ ++  +++  I G +G    +G W++  +  A+  ++  
Sbjct: 8   GAQLAWMTVALALATFMQVLDSTIANVAIPTIAGNLGSSNSQGTWVITSFGVANAISIPI 67

Query: 86  APWLATTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGFAAGALPPMLMSVAL 145
             WLA      R  + +  LF +   L   + +L  L+  RV+QG  AG L P+  S+ L
Sbjct: 68  TGWLAKRIGEVRLFLWSTALFVLASWLCGISNSLGMLIFFRVIQGVVAGPLIPLSQSLLL 127

Query: 146 RFLPPGIKVYGLACYALTATFGPNLGTPLAGLWTEYVGWQWAFWQIILPSLLAMVCVGWG 205
              PP  +   LA +++T    P  G  L G  ++   W W F+ I +P    ++ V   
Sbjct: 128 NNYPPAKRAMALALWSMTVIVAPIFGPILGGYISDNYHWGWIFF-INIPIGAVVILVAMS 186

Query: 206 LPQDPLRLERFKQFDWRGVLLGLPAISCTVLGLSLGDRWGWFDSPLICWLLGGGLLLLVL 265
             +        K  D  G++L +  I    + L  G    WF+S  I  L    ++ L+ 
Sbjct: 187 TLKGRETKTEIKPIDTVGLVLLIVGIGSLQVMLDQGKELDWFNSTEIIVLTVVAVVALLF 246

Query: 266 FMYNEWSEPLPFFQLRLLQRRNLSFALVTLAGVLVVLSGVGSIPSAYLAQIQGYRPAQTS 325
            +  E ++  P   L L + RN +   + ++   ++  G   +    L ++ GY      
Sbjct: 247 LIVWELTDDHPVVDLSLFKSRNFTVGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAG 306

Query: 326 PLMMLVAMPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAVSCV--------GSSLLTSE 377
                V +  ++  P+     N   +D R ++     M AV           G     S 
Sbjct: 307 LASAPVGLIPVLLSPIIGKFGN--RLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASA 364

Query: 378 WIRGDFYPFYLLQVFGQPMAVLPLLMLSTNGMTPQEGPFASSWFNTVKGLAAVIAGGLLD 437
           W +        +Q F      +PL  ++ +G+ P+    ASS  N  + LA  I   +  
Sbjct: 365 WPQ-------FIQGFAIACFFMPLTTITLSGLPPERMAAASSLSNFTRTLAGSIGTSITT 417

Query: 438 VLGTLRRHFHSNHLVD 453
            L T R   H + L +
Sbjct: 418 TLWTQRESQHHSQLTE 433