Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  111 bits (277), Expect = 2e-29
 Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 9/289 (3%)

Query: 5   DMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTPRA 64
           D+NLLV L+ALL E +V  AA R++LS  A+S  L R+RD   DP+LV A RG+ PT +A
Sbjct: 7   DLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMTPTVKA 66

Query: 65  LALREQVHGLVEQAGQVFRSRDDVDLVNLDRAFNIRTNDLFIALYGAQLLRMMLAQAP-- 122
           + L   +   ++Q      +R D D    D    I  +D   A     L+  + A+AP  
Sbjct: 67  VELAGPLRAALDQLRATLEAR-DFDPATADLTVTIACSDYIQAAVVMPLVVALRARAPGV 125

Query: 123 RTVLRFVPEGSGDDDAVLRNGHIDLIISSAIELGPEIKVQSLFNTYFVGLARVGHPIFDA 182
           R  +R +     +    L +G  DL++++       ++ Q LF   +V + R GHP    
Sbjct: 126 RVAVRHLMPDLIEQQ--LASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHPRLRR 183

Query: 183 PITPERFAAYPQISVS-RRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDLIL 241
            ++ E +A    + VS   G+   P+D  LA     R V +   SF      +  SD++ 
Sbjct: 184 GLSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAASDVVA 243

Query: 242 PIPANILNSVQRLKLPLRSFEIPVPLETVNVMQAWHPRFDNDPAHRWLR 290
            +P  +L         L   E+P   E  +V   WH R       RWLR
Sbjct: 244 LVPRRLLRDP---PARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWLR 289