Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 6e-30
 Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 16/302 (5%)

Query: 5   DMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTPRA 64
           D+NL +  DA+  E ++  A Q + ++  A+S  L R+R+   DP+ VR  +G+VPTP A
Sbjct: 7   DLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVPTPMA 66

Query: 65  LALREQVHGLVEQAGQVFR-SRDDVDLVNLDRA---FNIRTNDLFIALYGAQLLRMMLAQ 120
               + + G V  A  + R S  +  + N  +A   + I   DL  A+    L + +   
Sbjct: 67  ----QNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRL 122

Query: 121 APRTVLRFVPEGSGDDDAVLRNGHIDLIISSAIELGPEIKVQSLFNTYFVGLARVGHPIF 180
           AP  V+        +    L  G +D  + + +   P+++   L    +V   R GHP+ 
Sbjct: 123 APTVVIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHPLA 182

Query: 181 DA-PITPERFAAYPQISVSRRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDL 239
               +T + +     I +S R    G +D+AL    ++R++AL +  +  A   L  +D+
Sbjct: 183 GKDKLTLDDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLMASQVLQQTDM 242

Query: 240 ILPIPANILNSVQRLKLPLRSFEIPV-PLETVNVMQAWHPRFDNDPAHRWLR-QTLKACG 297
           ++ +P          +  L  F +PV  +  V     WH   D DPA+RW+R Q ++ C 
Sbjct: 243 VMTVPERFAR-----RHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIELCQ 297

Query: 298 RI 299
           ++
Sbjct: 298 QV 299