Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 6e-27
 Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 4/286 (1%)

Query: 5   DMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTPRA 64
           DMNLLV  +AL+ E ++   A+++ +   A+S  LGR+RD   DP+L+R GRG+ PTPRA
Sbjct: 10  DMNLLVIFEALMFEKNLTRVAEKLFMGQPAVSAALGRLRDLFDDPLLLRNGRGMEPTPRA 69

Query: 65  LALREQVHGLVEQAGQVFRSRDDVDLVNLDRAFNIRTNDLFIALYGAQLLRMMLAQAPRT 124
           +A+ +++   ++          D D       F I  +D         LL  +  +AP  
Sbjct: 70  VAILKELQPAMDTISGAVSRAKDFDPSTSCAVFRIGLSDDAEFGLFPPLLSQLREEAPGI 129

Query: 125 VLRFVPEGSGDDDAVLRNGHIDLIISSAIELGPEIKVQSLFNTYFVGLARVGHPIFDAPI 184
           ++           ++L +G I + +S   EL    K + L +   +    +      AP+
Sbjct: 130 IVVVRRANYLLMSSLLASGEITVGVSYTTELPANAKRKKLRD---IPCKVLRGDDGAAPL 186

Query: 185 TPERFAAYPQISVSRRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDLILPIP 244
           T + +   P   VS  G  +G ID+ LA     RRV L    F      L  + +I  +P
Sbjct: 187 TLDDYCERPHAMVSFSGDLSGNIDLDLARIGRARRVVLAVPQFSGLRALLAGTQIIATVP 246

Query: 245 ANILNSVQRLKLPLRSFEIPVPLETVNVMQAWHPRFDNDPAHRWLR 290
                ++      LR+ + P  ++   +   W    DNDPA RWLR
Sbjct: 247 DYAACALTE-GTALRAEDPPFAIDAAELSMVWSGVHDNDPAERWLR 291