Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  221 bits (562), Expect = 2e-62
 Identities = 126/297 (42%), Positives = 171/297 (57%), Gaps = 6/297 (2%)

Query: 3   LPDMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTP 62
           +PD+NLL+ LD LL EGSV  AA+R+ LSP+AMSR L R+R+  GDP+LVRAGRGLV TP
Sbjct: 1   MPDLNLLITLDVLLAEGSVAAAAKRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVATP 60

Query: 63  RALALREQVHGLVEQAGQVFRSRDDVDLVNLDRAFNIRTNDLFIALYGAQLLRMMLAQAP 122
           RAL LR+QV  LV++A  V R    +++  + R F +RT++ F+  +G  LL      AP
Sbjct: 61  RALELRDQVSRLVQEANAVLRPVQSLNMNQVTRTFTLRTSEEFVENFGPALLARAARDAP 120

Query: 123 RTVLRFVPEGSGDDDAVLRNGHIDLIISSA-IELGPEIKVQSLFNTYFVGLARVGHPIFD 181
              LRF+ + +  D  +LR G +DL         GPE+  Q+LF    VG+ R GHP+  
Sbjct: 121 GVRLRFIHK-ADKDSTLLREGSVDLETGVVDPTAGPEVLTQALFRDRLVGVVRSGHPLSR 179

Query: 182 APITPERFAAYPQISVSRRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDLIL 241
             ++ ER+AA   + VSRRG+  G ID  L    + R++  I   F +A+    D+DLI 
Sbjct: 180 GDVSVERYAAGQHVYVSRRGQDRGQIDDLLEAQGLTRQITTIVAGFATAIALARDTDLIA 239

Query: 242 PIPANILNSVQRLKLPLRSFEIPVPLETVNVMQAWHPRFDNDPAHRWLRQTLK-ACG 297
            +P             L  F +P+ L T  V   WHPR D D AHRWLR  L+  CG
Sbjct: 240 SVPERY---TAHQPEGLHRFALPLTLPTFTVAMLWHPRLDADLAHRWLRGCLREVCG 293