Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 7e-31
 Identities = 91/290 (31%), Positives = 136/290 (46%), Gaps = 13/290 (4%)

Query: 5   DMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTPRA 64
           D+NLLV LDALL E  V  AA+R++LS  A+S  L R+RD LGDP+LVR G  LVPT RA
Sbjct: 14  DLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVPTARA 73

Query: 65  LALREQVHGLVEQAGQV--FRSRDDVDLVNLDRAFNIRTNDLFIALYGAQLLRMMLAQAP 122
           L L      L E  GQV    + +  D  +  R F +  +D   A++   L+R +  +AP
Sbjct: 74  LELAPP---LTEALGQVQALLAPNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRREAP 130

Query: 123 RTVLRFVPEG-SGDDDAVLRNGHIDLIISSAIELGPEIKVQSLFNTYFVGLARVGHPIFD 181
              L+ +     G  D VL NG +DL      ++  E++   LF  ++  L         
Sbjct: 131 GIDLQIIQASREGMVDGVL-NGDLDLAAGVFPDMPAELRTTPLFEEHYTCLVDRDSLPAS 189

Query: 182 APITPERFAAYPQISVSRRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDLIL 241
             +    + + P + +  RG     I+ AL   +  R VA+    +  A   +  +DLIL
Sbjct: 190 GTLDLPTYLSRPHVLLEMRGSGTPEIERALTTIRERRHVAISLPHWGVAPQLIQGTDLIL 249

Query: 242 PIPANILNSVQRLKLPLRSFEIPVP--LETVNVMQAWHPRFDNDPAHRWL 289
            + +  L ++    L      +P P  + +     AWH R   D   +WL
Sbjct: 250 TVSSRGLLNIDHQHL----LAVPAPFHIPSFAFELAWHARRGGDSGLQWL 295