Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 3e-26
 Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 3/292 (1%)

Query: 3   LPDMNLLVALDALLDEGSVVGAAQRMNLSPAAMSRTLGRIRDALGDPILVRAGRGLVPTP 62
           LP+  LL   D L    SV  AA+++  S   +S  L R+R+ L DP+ VR   G+ PTP
Sbjct: 7   LPEPKLLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTP 66

Query: 63  RALALREQVHGLVEQAGQVFRSRDDVDLVNLDRAFNIRTNDLFIALYGAQLLRMMLAQAP 122
           RA  L      ++E   ++             R F +  +D         +L  + + AP
Sbjct: 67  RADQLIGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAP 126

Query: 123 RTVLRFVPEGSGDDDAVLRNGHIDLIISSAIELGPEIKVQSLFNTYFVGLARVGHPIFDA 182
              L       G+ ++ L +G  DL I     LG  +  Q LF   +V L+   HP    
Sbjct: 127 GIRLE-AARIDGNTESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGD 185

Query: 183 PITPERFAAYPQISVSRRGRANGPIDVALANHKVERRVALITTSFHSAMFSLPDSDLILP 242
            ++ ER+ A   + +S  G     ++  LA   +ERR+ L   +F      +  +DL+  
Sbjct: 186 GMSLERYRAEGHVQIS-FGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGT 244

Query: 243 IPANILNSVQRLKLPLRSFEIPVPLETVNVMQAWHPRFDNDPAHRWLRQTLK 294
           +P +I  ++  +   L+  + P  +E   V Q WH R+  D  +RWLR+ ++
Sbjct: 245 LPRHIGQTLADMH-GLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVVR 295