Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  183 bits (464), Expect = 5e-51
 Identities = 109/297 (36%), Positives = 166/297 (55%), Gaps = 4/297 (1%)

Query: 1   MDTLQNMRAFSCVAQLGSFTAAAAQLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 60
           MD LQ MR F  V  LGS +AAA  LD +   VSR ++ LE  +  RLL+RTTR+++LT 
Sbjct: 1   MDRLQAMRVFVTVVDLGSQSAAADHLDLSRPVVSRYLAELEDWVGARLLHRTTRKLSLTA 60

Query: 61  AGKRYLMRCEQILTYVEEAEAEASDAHARPAGQLKVHSMTGVGQHFVVDAIARYRETHPD 120
           AG   L RC Q+L    + +A  S+    P G L++   T  GQ  + +AIA Y + +P 
Sbjct: 61  AGSETLPRCRQLLELCGDMQAAVSEPDDAPRGLLRLSVSTSFGQAQLAEAIAEYVKRYPL 120

Query: 121 VTFDLTMANRVPDLLDEGYDVSIVLATELPDSGFVSQRLGITYSIVCASPAYIAQHGVAH 180
           VT DL M +R  +L+DE  D++I  + +L D   +++RL +  S+VCASPAY+  H    
Sbjct: 121 VTVDLQMLDRTVNLVDERIDLAIRTSNDL-DPNLIARRLTVCRSVVCASPAYLLSHPAPQ 179

Query: 181 KPADLLKHACLRMVSPVIPLEKWLFDGPEGQEMVNITSSPFMVNTADAMKTAIRSGMGVG 240
           K  DL  H CL           W F+   G+ +    +     N A  +     +G GV 
Sbjct: 180 KVEDLAAHNCL--THSYFGKSLWHFE-ERGEHVSVPINGNITSNEASTLLRVTLAGAGVS 236

Query: 241 VLPIYSAIEGLRDGSLVRVLPEYRLQELNLYAIYPSRQYLDAKIKTWVEYLRNSLPE 297
           +LP Y A + +R G LVR+LPE   +++N+YA+Y SR+++ + +++ +++L    PE
Sbjct: 237 MLPTYQAGDYIRRGELVRLLPEAEPRQMNIYAVYASRKHMPSALRSLLDFLVLRFPE 293