Pairwise Alignments

Query, 356 a.a., putative permease from Pseudomonas putida KT2440

Subject, 357 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  155 bits (392), Expect = 2e-42
 Identities = 105/331 (31%), Positives = 175/331 (52%), Gaps = 15/331 (4%)

Query: 19  VVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALERVRVPTRLAVMLVFALFM 78
           V+L V +FL       L  +L P L  ++LA+L   +V+ LE+  +     V+ VFALF 
Sbjct: 14  VLLCVFVFL-------LHSILTPFLVALLLAYLFDPVVDRLEKAGLSRTWGVVAVFALFT 66

Query: 79  GALAVFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSD----EQVLHAI 134
             +   +LVLVP+L  QL  L+   P ML   Q   +   +    L       ++V  AI
Sbjct: 67  LIITALVLVLVPMLAKQLFRLYELAPQMLDWLQHTAMPWAQAKLGLADGFWKFDKVKAAI 126

Query: 135 ESVRGEIGKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKDRELIGRWVSGYLPRQ 194
               G+        L+ + +S   L+  +  LVL+P++ F+ L+D +L+   +   LPR 
Sbjct: 127 SEHMGQTTDIVGVVLSQATASSLALIGWLTNLVLIPVVAFYLLRDWDLMMAKIRSLLPRD 186

Query: 195 RT-LLNRVGSEMNRQIANYIRGKGIEILICGIATYIAFISLGLNYAALLALLVGLSVVVP 253
           R   +  +  E +  +  ++RG+ + +L  GI      +++GL    L+ L+ GL+ +VP
Sbjct: 187 REERIVSLAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLAAIVP 246

Query: 254 YVGAVVVTVPVTLIALFQWGWGDQF--IYLMTVYAIIQALDGNVLVPLLFSEAVSLHPVA 311
           Y+G V+      +  LFQ+G GD +  + ++ V+ + QAL+G VL PLL  + + LHPVA
Sbjct: 247 YMGFVIGIGAALVAGLFQFG-GDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVA 305

Query: 312 IICAVLLFGGLWGFWGIFFAIPLATLIKAVL 342
           +I A+L  G L+GF GI  A+P+A +I  ++
Sbjct: 306 VIFAILAGGELFGFTGILLALPVAAVIMVLV 336