Pairwise Alignments

Query, 450 a.a., putrescine permease from Pseudomonas putida KT2440

Subject, 489 a.a., Lysine-specific permease from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  110 bits (276), Expect = 8e-29
 Identities = 113/449 (25%), Positives = 203/449 (45%), Gaps = 32/449 (7%)

Query: 13  LRKTLRLWHVIIIGLAYLTPMTVFDTFGI-VSGITAGHVPSAYILALAGILFTAVSYGTL 71
           LR+ L+  H+ +I +       +F   G  +S    G    +Y+L    + F   S G L
Sbjct: 13  LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGEL 72

Query: 72  VKRFPQSGSAYTYTQRAINPHVGFLVGWSSLLDYLLLPMVNALLAKLYLSAMFPEVPEWM 131
               P SGS  TY Q  +    GF +GW+   ++ +   V+ + A+L +S  FP+ P W+
Sbjct: 73  AAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWI 132

Query: 132 WVAGFVTLISLINMRSVNLVAHFNLLFVGVQVAIIAVFI---YLCVRGLDQGEGLG--TT 186
           W A F+ +I L+N  SV         F  ++V  + VFI    L + G+ +G      + 
Sbjct: 133 WSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSN 192

Query: 187 WSL--IPFADSQTQFSALAAGATILCFSFLGFDAVTCLSEETRDPAKTIPRA---IFLTA 241
           W++   PFA     F+A+   A I+ FSF G + +   + E+ DPAK IPRA   +F   
Sbjct: 193 WTIGEAPFAGG---FAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRI 249

Query: 242 LIGGVVFITVSYFIQAYF-PTMARFHDQEAALPEIAL---YVGGKLFQSIFIACTVINTI 297
           L+  V  I +   I  Y  P++ R   ++ ++    L   + G     ++  A  +   +
Sbjct: 250 LLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVL 309

Query: 298 ASGLASQTSVSRLLYVMGRDNVIPASVFARLHSRYKTP----VLNIAVVGLISLSAIFFD 353
           ++G +   + +R+LY +  D   P  +FA+L SR   P         + GL  L+++F +
Sbjct: 310 SAGNSGMYASTRMLYTLACDGKAP-RIFAKL-SRGGVPRNALYATTVIAGLCFLTSMFGN 367

Query: 354 LVTATSIINFGALVAF-SFVNLSVINHCYLREGNRKGL-ANQLKYL-----VLPTIGFCI 406
                 ++N   +  F +++ +++ ++ + R    +G   N L Y      + P   F +
Sbjct: 368 QTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFIL 427

Query: 407 IVSLWLDLNAHSLMFGGI-WAALGLVYLG 434
            + + L  N  + +   I W  +   Y+G
Sbjct: 428 CLIITLGQNYEAFLKDTIDWGGVAATYIG 456