Pairwise Alignments

Query, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  461 bits (1186), Expect = e-134
 Identities = 279/710 (39%), Positives = 404/710 (56%), Gaps = 30/710 (4%)

Query: 7   SIQWKITLLAGLCLLAIVALLVATSLTQAHRSAALVNQANTAMLEDSARQRLQAHAETQA 66
           SIQ+ +  LAG  +L++VA+LV  +L    R+  +V        E    QRL A A+TQA
Sbjct: 5   SIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQTQA 64

Query: 67  LRIQRYFMDAYQYGNGFARLVQVL--KDRGGSDL----RAELTRQARASLAGNPDVIGLY 120
             IQR            A    +L  KD  G       R +L      ++  NP ++G Y
Sbjct: 65  TLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKILGAY 124

Query: 121 LVFQPNALDQQDSHYLGQDAMGSNESGRFSLYWSQPSPGTLELEAMPETMLGDTSIGSNG 180
           + ++PNA+D  D+ Y+    +G    GRF  +W + + G+L L+ + +  + D +I S G
Sbjct: 125 IGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLAD--VNDQNILSTG 182

Query: 181 AAKNRWLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQ 240
              + +  C ++  + C ++P   +V    V++ S   P++  G   G+VG D+ +  +Q
Sbjct: 183 VRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQ 242

Query: 241 QLSVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPM-------------------- 280
            +  +  + L++G G++++ ++ G L   ++D S LG+                      
Sbjct: 243 DMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEV 302

Query: 281 --DKSVADGLLRVAHPFTPIPDTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSL 338
             D     G + +  PFT     A W ++L+LP S + A +  L   L+A  +       
Sbjct: 303 RYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMT 362

Query: 339 LIGLGTAIAGLLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGW 398
           + GL  A  GLL++WL   G+ RP+  + A L DIA GEGDLTRRL     DELG +   
Sbjct: 363 IAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANG 422

Query: 399 FNRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSAT 458
           FN FL KLQ +I QV  S+Q+  ++++ +A IA +T+ G+ +Q  EI+QVATA +EM+AT
Sbjct: 423 FNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTAT 482

Query: 459 ALDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQI 518
           A DVA NA+QAAQAA  ADQA+ +G+++V  T   I  LA  +  A+   + L   S  I
Sbjct: 483 AQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENI 542

Query: 519 GSVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVI 578
            ++L  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQ+TQ + EEI+ +I
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMI 602

Query: 579 EGLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQS 638
           + LQQGT+DVV  M   Q +  +S     +A  AL+ I +AV+VI+DMN QIASAAEEQS
Sbjct: 603 QQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQS 662

Query: 639 AVAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688
           AVAE++NRNV  I  V   +AG ADES+  S  L +LA QQ+ L+ QF+V
Sbjct: 663 AVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712