Pairwise Alignments

Query, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

Subject, 899 a.a., Tol-Pal system protein TolB from Xanthobacter sp. DMC5

 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 49/241 (20%)

Query: 204 SPRFAPDGKRIAYVSFEQK--------------RPRIFVQNIDTGR----REQVTNFEGL 245
           +P  +PDG  +A++S                   P++ V+N+ TG         T   G 
Sbjct: 344 NPVVSPDGTEVAFLSTASSLLQVPTNVSIPAFSSPQVLVKNLHTGEVTLASSSATGDVGN 403

Query: 246 NGAPA---WSPDGSRLAFVLSK--------DGNPDIYVMNVASRQISRVTAGPGINTEPF 294
             + A   ++ DGS++ F            +G  DI+V ++A+  ISR+      N +  
Sbjct: 404 QASTANIIFTQDGSKVEFYSKASNLVPGDTNGTSDIFVKDIATGAISRIDPNDPNNQDIV 463

Query: 295 WG-----KDGNTLYFTSDRGGKP-QIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVM 348
            G      DG+ + F     G P  I+ Q V+ G    V +   YN N   S D   +  
Sbjct: 464 NGFKAISSDGSKIVFDGAGIGSPHSIFIQDVATGDVTFVCYGNVYNQNLAFSPDGTKIAF 523

Query: 349 IHRQQGFT------NFKVAAQDLQRGSVKILSETS--------LDESPTVAPNGTMLIYA 394
           +   Q  +      N ++  +DL  G + + S  S          E+ + +P+GT + + 
Sbjct: 524 LSYPQDVSPGSNPGNMQLYVKDLATGQLTVESSDSAGHVGNSATTEAFSFSPDGTKIAFT 583

Query: 395 T 395
           +
Sbjct: 584 S 584



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 22/122 (18%)

Query: 207 FAPDGKRIAYVSFEQK--------RPRIFVQNIDTGR-REQVTNFEGLNG------APAW 251
           F+PDG +IA++S+ Q           +++V+++ TG+   + ++  G  G      A ++
Sbjct: 514 FSPDGTKIAFLSYPQDVSPGSNPGNMQLYVKDLATGQLTVESSDSAGHVGNSATTEAFSF 573

Query: 252 SPDGSRLAF------VLSKDGNPDIYVMNVASRQISRVTA-GPGINTEPFWGKDGNTLYF 304
           SPDG+++AF      ++   G   I++ ++ +  I+ +T      ++ P +  DG  L F
Sbjct: 574 SPDGTKIAFTSYSTNLVPGQGFNGIFIKDLQTGAITELTVDASSYSSHPVFTPDGAHLIF 633

Query: 305 TS 306
           TS
Sbjct: 634 TS 635



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 47/225 (20%)

Query: 217 VSFEQKRPRIFVQNIDTGRREQVTNFEG-----LNGAPAWSPDGSRLAFVLSKD------ 265
           +SFE   P I   + D G         G     L+  P  SPDG+ +AF+ +        
Sbjct: 308 LSFENHTPSILASSPDGGISVISVGAVGQHANNLSSNPVVSPDGTEVAFLSTASSLLQVP 367

Query: 266 --------GNPDIYVMNVASRQI----SRVTAGPGINTEP---FWGKDGNTLYFTS---- 306
                    +P + V N+ + ++    S  T   G         + +DG+ + F S    
Sbjct: 368 TNVSIPAFSSPQVLVKNLHTGEVTLASSSATGDVGNQASTANIIFTQDGSKVEFYSKASN 427

Query: 307 ----DRGGKPQIYKQSVSGGGAERV--------TFVGNYNANPKLSADEKTLVMIHRQQG 354
               D  G   I+ + ++ G   R+          V  + A   +S+D   +V      G
Sbjct: 428 LVPGDTNGTSDIFVKDIATGAISRIDPNDPNNQDIVNGFKA---ISSDGSKIVFDGAGIG 484

Query: 355 FTNFKVAAQDLQRGSVKILSETSL-DESPTVAPNGTMLIYATRQQ 398
            +   +  QD+  G V  +   ++ +++   +P+GT + + +  Q
Sbjct: 485 -SPHSIFIQDVATGDVTFVCYGNVYNQNLAFSPDGTKIAFLSYPQ 528