Pairwise Alignments

Query, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

Subject, 1089 a.a., Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 6/130 (4%)

Query: 234 GRREQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEP 293
           G   ++T  +G    P +SPDGS++AF    +GN D+YVM        R+T     +   
Sbjct: 54  GLANRLTTSKGTESFPKFSPDGSKVAFSGVYNGNSDVYVMPFQGGMPQRLTYHGMSDRMV 113

Query: 294 FWGKDGNTLYFTSDRGGKP----QIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMI 349
            W  DGN + F S R  +     Q YK SV GG  E++     Y     +S D   +   
Sbjct: 114 DWYGDGNHILFASSRESEKQRYNQFYKVSVDGGLPEKLPV--PYGEFGMISPDGNKIAYT 171

Query: 350 HRQQGFTNFK 359
            + + F  +K
Sbjct: 172 PKSRAFRTWK 181



 Score = 36.6 bits (83), Expect = 4e-06
 Identities = 45/211 (21%), Positives = 78/211 (36%), Gaps = 21/211 (9%)

Query: 205 PRFAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNF--EGLNGAPAWSPDGSRLAFVL 262
           P ++PDG+ +AY S       + ++++  G  E+  +    G      WSPD  ++AFV 
Sbjct: 353 PAWSPDGRYVAYWSDRTGEYELTIKDLKNGGAEKTLSAYGAGYRYQLYWSPDSKKVAFV- 411

Query: 263 SKDGNPDIYVMNVASRQISRVTAGPGI------NTEPFWGKDGNTLYFTSDRGGKPQ-IY 315
             D   DIYV +    + + V     +      N    W  D   L F  +   +   I 
Sbjct: 412 --DKAMDIYVYDKEKDKTTHVDKQKSLFQYGLDNFSVSWSPDSRYLAFEKNLTNQHNAIA 469

Query: 316 KQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQ------QGFTNFKVAAQDLQRGS 369
              +      ++T     + NP    + K L  +  +        F    V A   Q  +
Sbjct: 470 VFDIEEEALHQITSGFYSDNNPVFGPEGKYLYCLTNRDFDPVYSDFEGTWVYANATQLAA 529

Query: 370 VKILSETSLDESPTVAPNGTMLIYATRQQGR 400
           + +L ET+   SP    N +  +    Q  +
Sbjct: 530 IPLLKETA---SPLAPKNDSTSVKEEEQSAK 557



 Score = 35.4 bits (80), Expect = 9e-06
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 245 LNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYF 304
           L+   A  PD S      S  G  DI+++       +R+T   G  + P +  DG+ + F
Sbjct: 23  LDAKIAQYPDVSDTHITFSYGG--DIWIVPKTGGLANRLTTSKGTESFPKFSPDGSKVAF 80

Query: 305 TSDRGGKPQIYKQSVSGGGAERVTFVG 331
           +    G   +Y     GG  +R+T+ G
Sbjct: 81  SGVYNGNSDVYVMPFQGGMPQRLTYHG 107



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 189 GARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQNIDTGRREQVTNFEGLNGA 248
           G  A  L  S+     P+F+PDG ++A+         ++V     G  +++T     +  
Sbjct: 53  GGLANRLTTSKGTESFPKFSPDGSKVAFSGVYNGNSDVYVMPFQGGMPQRLTYHGMSDRM 112

Query: 249 PAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTE---PFW-----GKDGN 300
             W  DG+ + F  S++     Y       Q  +V+   G+  +   P+        DGN
Sbjct: 113 VDWYGDGNHILFASSRESEKQRY------NQFYKVSVDGGLPEKLPVPYGEFGMISPDGN 166

Query: 301 TLYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNANPKLS 340
            + +T  +    + +K+   G   +  TF    NA+  +S
Sbjct: 167 KIAYT-PKSRAFRTWKRYKGGMATDIFTFDLASNASENIS 205



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 252 SPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTE-PFWGKDGNTLYFTSDRGG 310
           S DG+R  F    +   +++ +      +  +T   G+    P W  DG  + + SDR G
Sbjct: 315 SYDGNRAVF----EARGELFSVPAKDGPVINLTQSSGVAERYPAWSPDGRYVAYWSDRTG 370

Query: 311 KPQIYKQSVSGGGAERV--TFVGNYNANPKLSADEKTLVMIHR 351
           + ++  + +  GGAE+    +   Y      S D K +  + +
Sbjct: 371 EYELTIKDLKNGGAEKTLSAYGAGYRYQLYWSPDSKKVAFVDK 413