Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

 Score =  394 bits (1011), Expect = e-114
 Identities = 198/324 (61%), Positives = 246/324 (75%), Gaps = 1/324 (0%)

Query: 11  SGRDR-EEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFGPPGLGKT 69
           SG  R ++  D  +RP  L E++GQ   R  + +FI+AAR RGE+LDH L  GPPGLGKT
Sbjct: 7   SGEKRGDDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPGLGKT 66

Query: 70  TLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPA 129
           TLA I++ EMGV  +STSGP++ + GDLAA+LTNLE  DVLFIDEIHRLSP VEE+LYPA
Sbjct: 67  TLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEILYPA 126

Query: 130 MEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNDKDL 189
           MED++LD++IGEGPAARS+K+ LP FTLVGATTR+G+LT PLRDRFGI  RL+FY  ++L
Sbjct: 127 MEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYTVEEL 186

Query: 190 STIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKAVADM 249
             IV R A ++G+AI   GA EIARRARGTPRIA RLLRRVRD+A V    +I + +AD 
Sbjct: 187 EKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRKIADR 246

Query: 250 ALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLEPYLIQQG 309
           AL  L+VD  G D  DRR L  + E + GGPVGVD LAAA+SE R  IE+++EP+L+QQG
Sbjct: 247 ALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFLVQQG 306

Query: 310 YIMRTPRGRVVTRHAYLHFGLNIP 333
           +I RTPRGR++T  A+ H GL  P
Sbjct: 307 FIQRTPRGRMLTGAAFRHLGLAEP 330