Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

 Score = 57.0 bits (136), Expect = 9e-13
 Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 36/250 (14%)

Query: 23  IRPLSLDEYIGQP-VVREQMALFIQAARGRGESLDHTLIFGPPGLGKTTLANIIAHEMGV 81
           +RP +L E IGQ  ++   M+L I    G+  S    +++GPPG GKTT+A ++A     
Sbjct: 13  LRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSC---ILWGPPGTGKTTIARLMADAFDA 69

Query: 82  SVKSTSGPI-----LERPGDLAAMLTN--LEPHDVLFIDEIHRLSPVVEEVLYPAMEDFQ 134
              S S  +     +    DLA    +   +   ++F+DE+HR +   ++   P +E   
Sbjct: 70  QFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHVES-- 127

Query: 135 LDIMIGEGPAARSIKLDLPPFTLVGATTR--AGMLTNPLRDRFGIVQRLEFYNDKDLSTI 192
                               FT +GATT   +  + + L  R   V  L+  N+ DL  I
Sbjct: 128 ------------------GLFTFIGATTENPSFEVNSALLSR-AAVYVLQSLNEDDLKQI 168

Query: 193 VSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQITKAVADMALN 252
           V+R+ +I  +   D  A  + R        A RLL  +   A      +++    +  L 
Sbjct: 169 VTRAQDIQAVPAIDTAA--VDRLVAYADGDARRLLNTLETLAVAARAEKLSNISDEWLLR 226

Query: 253 LLDVDERGFD 262
           +L    R +D
Sbjct: 227 VLGERMRRYD 236