Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 340 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Sphingobium sp. HT1-2

 Score =  394 bits (1012), Expect = e-114
 Identities = 205/337 (60%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 3   EADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLIFG 62
           E DRLI  + R   E  D A+RP SLDE++GQ   RE + +FIQAAR RGE+LDH L FG
Sbjct: 3   EEDRLITPARR--AEDVDAALRPKSLDEFVGQQAARENLRIFIQAARTRGEALDHVLFFG 60

Query: 63  PPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVV 122
           PPGLGKTTLA I+A EMGV  ++TSGP++ + GDLAA+LTNL+  DVLF+DEIHRL+P V
Sbjct: 61  PPGLGKTTLAQIVAKEMGVGFRATSGPVIAKSGDLAALLTNLDEGDVLFVDEIHRLNPAV 120

Query: 123 EEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLE 182
           EEVLYPAMED  LD+MIGEGP+ARS+++DLP FTLVGATTR G+LT PLRDRFGI  RL+
Sbjct: 121 EEVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRLQ 180

Query: 183 FYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQI 242
           FY   +L  +V R+A +L LAI   GA EIARR+RGTPRIA RLLRRVRD+A V G   +
Sbjct: 181 FYTVDELELVVRRAARLLDLAITSDGAIEIARRSRGTPRIAGRLLRRVRDFANVAGAPTV 240

Query: 243 TKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDVLE 302
              VAD AL  L+VD  G D  DRR L  + + + GGPVGV+ LAA +SE R TIE+V+E
Sbjct: 241 DAKVADAALQRLEVDHLGLDLMDRRYLHMIADIYRGGPVGVETLAAGLSEARDTIEEVVE 300

Query: 303 PYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRLGEG 339
           PYLIQ G I RT RGR +    + H GLN P    +G
Sbjct: 301 PYLIQLGLIARTARGRCLNGPGWKHLGLNPPAGSQDG 337