Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 447 a.a., replication-associated recombination protein A from Dickeya dadantii 3937

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 43/236 (18%)

Query: 23  IRPLSLDEYIGQPVVR---EQMALFIQAARGRGESLDHTLIFGPPGLGKTTLANIIAHEM 79
           +RP  L +YIGQ  +    + +   I+A +     L   +++GPPG GKTTLA +I    
Sbjct: 20  MRPAKLAQYIGQQHLLGPGKPLPRAIEAGQ-----LHSMILWGPPGTGKTTLAELIGRYG 74

Query: 80  GVSVKS----TSG-PILERPGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDFQ 134
              V+     TSG   +    + A    +     +LF+DE+HR +   ++   P +ED  
Sbjct: 75  QADVERISAVTSGIKEIREAIERARQNRDAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134

Query: 135 LDIMIGEGPAARSIKLDLPPFTLVGATTR--AGMLTNPLRDRFGIVQRLEFYNDKDLSTI 192
           +                    T +GATT   +  L + L  R   V  L+  +  D+  +
Sbjct: 135 I--------------------TFIGATTENPSFELNSALLSR-ARVYLLKALSADDIEQV 173

Query: 193 VSRSANI----LG---LAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKGQ 241
           + ++       LG   + + D     +A    G  R +  LL  + D AEV   GQ
Sbjct: 174 LDQALQDKERGLGGQQIVLPDDTRRLLAELVNGDARRSLNLLEMMADMAEVDASGQ 229