Pairwise Alignments

Query, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Agrobacterium fabrum C58

 Score =  395 bits (1014), Expect = e-114
 Identities = 201/333 (60%), Positives = 245/333 (73%), Gaps = 2/333 (0%)

Query: 1   MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLI 60
           M +ADRLI    R  +   D  +RP SLD++ GQ   R  + +FI+AA+ RGE+LDH L 
Sbjct: 1   MSDADRLITPEKRGEDI--DTTLRPQSLDDFTGQAEARANLKVFIEAAKNRGEALDHVLF 58

Query: 61  FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP 120
            GPPGLGKTTLA I+A E+GV+ KSTSGP++ + GDLAA+LTNLE  DVLFIDEIHRL+P
Sbjct: 59  VGPPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNP 118

Query: 121 VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR 180
            VEE+LYPAMEDFQLD++IGEGPAARS+K+DL  FTLV ATTR G+LT PLRDRFGI  R
Sbjct: 119 AVEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVR 178

Query: 181 LEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG 240
           L FY   +L  IV R A ++GL + D GA EIARRARGTPRIA RLLRRVRD+AEV    
Sbjct: 179 LAFYTVDELELIVRRGARLMGLNMTDGGAREIARRARGTPRIAGRLLRRVRDFAEVARAE 238

Query: 241 QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV 300
            +T+ +AD AL  L VD  G D  D R L  +   F GGPVG++ +AA +SE R  IED+
Sbjct: 239 AVTREIADEALTRLLVDNMGLDQLDMRYLTMIAVNFGGGPVGIETIAAGLSEPRDAIEDI 298

Query: 301 LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIP 333
           +EPY+IQQG+I RTPRGR++T  A+ H GL  P
Sbjct: 299 IEPYMIQQGFIQRTPRGRILTATAWKHLGLQPP 331