Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 433 a.a., DNA polymerase IV from Xanthobacter sp. DMC5

 Score =  207 bits (526), Expect = 5e-58
 Identities = 137/338 (40%), Positives = 183/338 (54%), Gaps = 13/338 (3%)

Query: 6   IIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSRHAL 65
           + HVDCD FYAA+E RD+P LA  P+ +GG    RGV++T  Y AR +GVRSAM    AL
Sbjct: 44  VAHVDCDAFYAAVEKRDNPDLAHVPLIIGGGK--RGVVSTACYIARIHGVRSAMPMFKAL 101

Query: 66  KLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQ-WYSGSATRI 124
            LCPD +++KP  E Y +  RE+    +  T L+EPLS+DEA+LD+S ++  +  S  R 
Sbjct: 102 ALCPDAVVLKPNMEKYVKVGREVRARMKALTPLVEPLSIDEAFLDLSGTEALHQASPART 161

Query: 125 AEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVARLH 184
                R V R + ITVS G+A NKFLAKIASD  KP G  VI  +E   F+A  PV  + 
Sbjct: 162 LARFARDVEREVGITVSVGLAANKFLAKIASDLDKPRGFSVIGQSEAAEFLAPRPVTFIW 221

Query: 185 GVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRRQS 244
           GVG     KL R G  T   L+      L R +G+ G RL  LA G+D R V  +   +S
Sbjct: 222 GVGAAFGGKLARDGFSTIGDLQRAEPADLARRYGAEGLRLSRLAFGLDTRKVEPEREAKS 281

Query: 245 VSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTTMEQ 304
           VS E T+D D+  L      L  L + ++ER+ R   + R     +K+K  DF   T  +
Sbjct: 282 VSAETTFDRDIGALRPLEQTLYALSEEVSERLKRAGIAGR--SVTLKLKSADFRLRTRSR 339

Query: 305 ------AGAGRDLESYRQLLGQAFARGGKPVRLLGVGV 336
                   A R   +  +LL +     G   RL+GVGV
Sbjct: 340 TLDAPTCLAARINAAAHELLVK--ETDGTLFRLIGVGV 375