Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 352 a.a., DNA polymerase IV from Pseudomonas simiae WCS417

 Score =  577 bits (1488), Expect = e-169
 Identities = 285/349 (81%), Positives = 316/349 (90%)

Query: 1   MSLRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMS 60
           M+ RKIIHVDCDCFYAAIEMRDDP LA +P+AVGGS D RGVIATCNYEARAYGVRSAMS
Sbjct: 1   MTQRKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMS 60

Query: 61  SRHALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGS 120
           SRHALKLCPDL IVKPR EAY+EAS+EI TIFRDYT+LIEPLSLDEAYLDVSDS  + GS
Sbjct: 61  SRHALKLCPDLTIVKPRMEAYKEASKEIQTIFRDYTDLIEPLSLDEAYLDVSDSSHFGGS 120

Query: 121 ATRIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPV 180
           ATRIA+DIRRRV+  LHITVSAGVAPNKFLAKIASDW+KPNGLFVITP++VE FV+ L V
Sbjct: 121 ATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSQLRV 180

Query: 181 ARLHGVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDS 240
           ++LHGVGKVTADKL RLGIE CL LREW++LALVREFGSFGERLW LARGID+R V NDS
Sbjct: 181 SKLHGVGKVTADKLARLGIEDCLQLREWNKLALVREFGSFGERLWSLARGIDDRVVQNDS 240

Query: 241 RRQSVSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQT 300
           RRQS+SVENTYD DLPDL+SCLA+LPEL+++L  R+AR+DSSYR  KPFVKVKFHDF+QT
Sbjct: 241 RRQSISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQT 300

Query: 301 TMEQAGAGRDLESYRQLLGQAFARGGKPVRLLGVGVRLRDLRGAHEQLE 349
           T+EQAGAGRDLESY+QLL QAF RGGKPVRLLG+GVRL DL   +EQLE
Sbjct: 301 TLEQAGAGRDLESYQQLLTQAFNRGGKPVRLLGIGVRLLDLSNGNEQLE 349