Pairwise Alignments

Query, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

Subject, 356 a.a., DNA polymerase IV from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  260 bits (664), Expect = 4e-74
 Identities = 155/353 (43%), Positives = 214/353 (60%), Gaps = 12/353 (3%)

Query: 3   LRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSR 62
           +RKIIH+D D F+A++E RD+P L G+P+AVGGS   RGV+A  +YEAR YGV SA++S+
Sbjct: 1   MRKIIHIDMDAFFASVEQRDNPELRGKPVAVGGSRA-RGVVAAASYEARKYGVHSALASK 59

Query: 63  HALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGSAT 122
            A + CP L+ VK RFE Y   SR+I  IF  YT+L+EPLSLDEAYLDV++++    SA+
Sbjct: 60  IASQRCPHLIFVKARFEVYSAVSRQIREIFHAYTDLVEPLSLDEAYLDVTENKIGMPSAS 119

Query: 123 RIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVAR 182
            IA +IR R+     +T SAGV+ NKFLAKIASD  KPNG  +ITP+  E  VA L + +
Sbjct: 120 IIANEIRARILEETGLTASAGVSYNKFLAKIASDMNKPNGFTLITPDVAENLVAGLVIEK 179

Query: 183 LHGVGKVTADKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRR 242
            HG+GKVTA K+  +GI T   LR+ +   LVR FG  G   + +AR  D+R V     R
Sbjct: 180 FHGIGKVTAAKMQAMGILTGADLRQRTEEELVRHFGKVGRYYYRIARAQDDREVQPHRIR 239

Query: 243 QSVSVENTYDTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTT- 301
           +S+  E T+D DL +    L +L  L   + + + R+  + +     +K+K+ DF+Q T 
Sbjct: 240 KSIGSERTFDVDLVEEHDMLLQLDSLCQEVAQDMERLKVTAK--TVTLKIKYFDFTQNTR 297

Query: 302 -----MEQAGAGRDLESYRQLLGQAFARGGKPVRLLGVGVRLRDLRGAHEQLE 349
                 E + A       R LL +       PVRLLGV V    L   H++L+
Sbjct: 298 SKTFLSEFSSADAMYTIVRDLL-RTPQLPLYPVRLLGVSV--SSLLYQHDRLQ 347