Pairwise Alignments

Query, 236 a.a., S4 domain protein from Pseudomonas putida KT2440

Subject, 243 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 27/241 (11%)

Query: 3   EPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQQRVELLPG----ARA 58
           + VR++K L E   CSRR A++ +E G +T++G        KV +   ++ PG       
Sbjct: 4   DTVRINKYLSEIGYCSRRAADKLLEEGCITING--------KVPELGTKVSPGDDVRVNG 55

Query: 59  ETLEP-----VTLLLNQPAGMDSEDARASMNMGSLSEAHREGVRALHGHFARQACVAPLE 113
           + + P     + +  ++P G+              ++  ++ +     H  R   +  L+
Sbjct: 56  KLVSPPKEDFIYIAFHKPVGIVCTTD---------TKREKDNIIDYINHPKRIFPIGRLD 106

Query: 114 RGASGLQVFTQDWRVSRKIEADLRRLEQEFIIEVRGETTPQALERLARGAMRNDRELPKA 173
           + + GL   T D  +  KI       E+E+++ V    TP  + ++A G    D    K 
Sbjct: 107 KPSEGLIFLTNDGDIVNKILRARNNHEKEYVVTVDKPITPNFIHKMANGVPILDTVTRKC 166

Query: 174 KASWQNETHLRMVLKNPQPGQISELCAYLRLELLGMRRIRLGGVSMGKLPLGQWRYLATS 233
           K     +   ++VL      QI  +C YL  E+  ++RIR+  V +  +P+G+WRYL  +
Sbjct: 167 KVEQIGKRKFKIVLTQGLNRQIRRMCQYLDYEVTKLKRIRIMNVQL-DMPVGKWRYLTPA 225

Query: 234 E 234
           E
Sbjct: 226 E 226