Pairwise Alignments

Query, 236 a.a., S4 domain protein from Pseudomonas putida KT2440

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 19/240 (7%)

Query: 2   SEPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQQRVELLPGARAETL 61
           S  +RL+K +     CSRR+A++ IE G V V+G V+ +  ++V      +  G      
Sbjct: 145 SSEIRLNKYIANAGICSRRDADKLIEKGEVKVNGEVITELGYRVLLTDKVVYKGKLINPE 204

Query: 62  EPVTLLLNQPAGM-----DSEDARASMNMGSLSEAHREGVRALHGHFARQACVAPLERGA 116
           +PV +LLN+P        D  + +  M++  +S A  E          R   V  L+R  
Sbjct: 205 KPVYVLLNKPKDFITTTDDPMNRKTVMHL--VSSACEE----------RIFPVGRLDRNT 252

Query: 117 SGLQVFTQDWRVSRKIEADLRRLEQEFIIEVRGETTPQALERLARGAMRNDR--ELPKAK 174
           +GL +FT D  ++ K+     ++ + + + +    T    E +A G    D    +   +
Sbjct: 253 TGLLLFTNDGELAAKLSHPAEKVRKIYQVTLDSPITKTHFEEIAEGLTLEDGLVNVDDIQ 312

Query: 175 ASWQNETHLRMVLKNPQPGQISELCAYLRLELLGMRRIRLGGVSMGKLPLGQWRYLATSE 234
              ++ T L + +   +   +  + A+L  E++ + R+   G++   L  G+WR+L   E
Sbjct: 313 ILSKDRTILGLEIHVGKNRIVRRIFAHLGYEVVALDRVTYAGLTKKDLSRGKWRFLTEKE 372