Pairwise Alignments

Query, 236 a.a., S4 domain protein from Pseudomonas putida KT2440

Subject, 259 a.a., pseudouridine synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  103 bits (258), Expect = 2e-27
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 3   EPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQ-QRVELLPGARAETL 61
           EPVR++K L +   CSRREA+  I  G V++DG  +     K++  + + L   A+A   
Sbjct: 11  EPVRVNKWLGQTGVCSRREADTLIANGLVSIDGETISDAGRKIQPGETLTLNDTAQAALA 70

Query: 62  EPVTLLLNQPAGMDS--EDARASMNMGSLSEAHREGVRALHGHFARQACVAPLERGASGL 119
             +TL+L++P G  S   D      +  L   +R G        A    +  L+  + GL
Sbjct: 71  TGMTLVLHKPVGYVSGQPDPGKIPAVRLLKTPNRVGEGETPARDASLPPIGRLDEDSRGL 130

Query: 120 QVFTQDWRVSRKIEADLRRLEQEFIIEVRGETTPQALERLARGAMRNDRELPKAKASWQN 179
            + + D  V++ +      L++E+++ V G+ T   L +L  G   ND+ L  A+ +   
Sbjct: 131 LLLSSDGVVAKAVIGPASELDKEYLVVVEGQITEGKLSKLRHGLSLNDKPLKPARVTQIE 190

Query: 180 ETHLRMVLKNPQPGQISELCAYLRLELLGMRRIRLGGVSMGKLPLGQWRYLATSER 235
              LR VL   +  QI  +C  + LE++ + R R+G + +G LP G+WR+L   ER
Sbjct: 191 PQRLRFVLTEGKYRQIRRMCELVGLEVVDLYRTRIGPLVLGDLPEGRWRHLTDQER 246