Pairwise Alignments

Query, 448 a.a., sensor protein from Pseudomonas putida KT2440

Subject, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 3e-27
 Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 16/284 (5%)

Query: 171 GAALLALMVLL-------WAGLTWGLRSLRRLSHELDEVESGARDGLSGEHP-RELLRLT 222
           G  LL L++ L       W  +   LR  R++S E  E        LS   P +EL  L 
Sbjct: 171 GYYLLPLVISLPFLIFPAWLSVRLALRPWRQVSKETAERGPADLTPLSYTPPHKELQPLV 230

Query: 223 RSLNRLLRSEREQRTRYRDSLDDLAHSLKTPLAVLQGVGESLQQRS---GEREQARVLQS 279
           +S+N LL+  R+  +R R  + D AH L+TPLA ++   E+L+++S   G+RE    L  
Sbjct: 231 QSINSLLQRVRDSTSRERSLIADAAHELRTPLAAMRVNVEALKEQSTDEGQRELMGNLLR 290

Query: 280 QIERMSQQID--YQLQRASLRKSGLVRHSVLLRPLLDSLCSTLAKVYREKRVDVVLELPD 337
             +R ++ +    QL R+       +   + L  L+    + +  +   + +++ L   D
Sbjct: 291 SNDRAARLVGQLLQLMRSDAVSDNALPVMLSLDGLVQDRLAMIEGLASARGIELELVCED 350

Query: 338 AAQVPMEQGALLEMLGNLLENA--YRLSLGQVRVSLMKAPGYLTLCIEDDGPGVPVDQRE 395
              V  E+ +L+ M+ NL+ NA  Y  S   V V +     +  L + D GPG+P   RE
Sbjct: 351 RVPVLGERESLVSMIDNLVNNAIKYSPSGSTVVVHVAHEGPHALLTVADQGPGIPAALRE 410

Query: 396 RILERGER-LDSQHPGQGIGLAVVKDIVDSYDAELSLGDSPLGG 438
           R+ +R  R  D    G G+GLA+VK ++D +  E++LG++  GG
Sbjct: 411 RVFDRFFRNPDQTQSGSGLGLAIVKSVIDRHGGEVTLGETAEGG 454