Pairwise Alignments

Query, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 254 a.a., response regulator transcription factor from Pseudomonas fluorescens SBW25

 Score =  188 bits (477), Expect = 1e-52
 Identities = 104/223 (46%), Positives = 144/223 (64%), Gaps = 2/223 (0%)

Query: 7   RILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGLS 66
           R LIV+DD  + EL  +YL   G       DG    + +     D+V+LDLMLPGEDGLS
Sbjct: 26  RALIVDDDVPIRELLIDYLARFGILATGVTDGTTMRQAMQAETFDVVVLDLMLPGEDGLS 85

Query: 67  ICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRR-SET 125
           +CR +RS+   PILMLTAR +  D++ GL+LGADDY+ KP  PR L+ARIQ +LRR  + 
Sbjct: 86  LCRWLRSESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDD 145

Query: 126 VDSKRQDLAFGALRIDNRLREARLGEQL-IELTGAEFDLLWLLASNAGRVLTREQIFTAL 184
              +R ++ F   R+++ LR+    + L + L+ AEF LLW+      RVL+REQ+  A 
Sbjct: 146 RTEQRANIRFDNWRLNSVLRQLVADDGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAA 205

Query: 185 RGVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLF 227
           RG   +  DRSID+ +S++R K+GDDP  P+LIKT+R +GYLF
Sbjct: 206 RGRSIEAFDRSIDLLVSRLRQKLGDDPKAPQLIKTVRGEGYLF 248