Pairwise Alignments

Query, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 250 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  195 bits (496), Expect = 6e-55
 Identities = 95/233 (40%), Positives = 156/233 (66%), Gaps = 8/233 (3%)

Query: 7   RILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGLS 66
           +I+ VED+  + +L A YL  +  +V VE  G RA   ++   PDLV+LD+MLPG+DG++
Sbjct: 15  KIVYVEDEPEVGQLIAAYLGKHDMDVIVEPRGDRAEEVVVRENPDLVLLDIMLPGKDGMT 74

Query: 67  ICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRRSETV 126
           +CR +R++++GPI++LT+   +++ +  L++GA+DY+ K   P +LLAR++  LR+  ++
Sbjct: 75  LCRDLRARWEGPIVLLTSLDSDMNHILSLEMGANDYILKTTPPAVLLARLRLHLRQHASI 134

Query: 127 D--------SKRQDLAFGALRIDNRLREARLGEQLIELTGAEFDLLWLLASNAGRVLTRE 178
           +        +  + + FG L ID   R+  L  +LI L+ A+FDLLW LA++AG+++ R+
Sbjct: 135 EREAPAPSLTPHKAMRFGTLSIDPINRQVLLSGELIALSTADFDLLWELATHAGQIMDRD 194

Query: 179 QIFTALRGVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLFVGEA 231
            +   LRGV YDG DRS+D+ IS++R K+ D+  +P  IKT+R+KGYLF   A
Sbjct: 195 ALLKNLRGVSYDGMDRSVDVAISRLRKKLQDNATEPYRIKTVRNKGYLFAPHA 247