Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 454 a.a., porin from Pseudomonas simiae WCS417

 Score =  294 bits (752), Expect = 4e-84
 Identities = 178/447 (39%), Positives = 245/447 (54%), Gaps = 54/447 (12%)

Query: 15  GVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFT 74
           G IA   G   AAGFVED KATLGLRNFYIN +  N +   +K EEW Q F L   SG+T
Sbjct: 13  GAIAQQAG---AAGFVEDSKATLGLRNFYINTDNRNGTGA-NKNEEWGQGFDLRFISGYT 68

Query: 75  EGPIGFGVDVLGLWSVKLDGGGGT-------------YGTALLPRHDDGRPADDYGRLAV 121
           +G +GFGVD +GL  V+LD GGGT             YG  + P   +G+  +DY  L +
Sbjct: 69  QGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGL 128

Query: 122 AGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSP 181
             KA+IS+TELK+G   P LP++ ++DGR LPQTF+GGQ+T+N+I  LTL GGQ      
Sbjct: 129 TAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKG 188

Query: 182 RNDASMEDMSYGGG--------VSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQ 233
           RN +S E++S  G          S++F + GG+YK  +D T    +   L+D Y+Q +L 
Sbjct: 189 RNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLT-AQYYYGNLEDFYKQHFLG 247

Query: 234 LSHSQPVGDWTLGANLGYFHGDEDGSE---------------RA--GQLDNKTYSGMFSA 276
           L+H+  +G   L ++L YF+  +DG+                RA  G++DN  YSG+F  
Sbjct: 248 LTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLY 307

Query: 277 KYGGSTFWVGLQKVDGDT---WMRVNGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVT 333
              G TF  G Q  +G +   W+     S   L  D     F  A ER+WQ R+ ++F  
Sbjct: 308 TVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAK 367

Query: 334 VGVPGLTLMNRYISGRDVHSGGVTDGK-------EWVRETELAYVIQSGAFKDLSVKWRN 386
           VGVPGLT    Y+ G D+ +   T  +       EW R+  +AYVI  G  K+L V W+N
Sbjct: 368 VGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLKNLGVAWKN 427

Query: 387 SSIRRDYSN-NEFDENRLIFNYPLSLL 412
           +  R D +   + DENRLI +Y + LL
Sbjct: 428 AMWRTDIAGARDQDENRLIVSYSIPLL 454