Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  217 bits (552), Expect = 6e-61
 Identities = 154/441 (34%), Positives = 222/441 (50%), Gaps = 44/441 (9%)

Query: 10  ALLGAGVIAGLPGTSLAA---------GFVEDGKATLGLRNFYINRNFTNPSNPQSKAEE 60
           +LL   V AG+   + A          GF+E    T  LRN+Y+NRN       ++   +
Sbjct: 6   SLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRN---REGGRADNID 62

Query: 61  WTQSFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLA 120
           WTQ  +L+  SGFT+G IGFGVD      +KLD      GT  LP    G P D YG + 
Sbjct: 63  WTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGSVG 122

Query: 121 VAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRG-N 179
            A K ++SKT+LK G+  P  P+  +   R LPQT  G  +TS+EIAGL L  G F   N
Sbjct: 123 AAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTN 182

Query: 180 SPRNDASMEDM--SYGGGVSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHS 237
           S        D+  +Y    ++  +F+GG+Y F+   +   ++   L+D+++Q Y  L++ 
Sbjct: 183 SGMTSNHDHDIYATYANIAANSASFLGGKYTFSPSLSAT-VYAGELEDIWRQYYTNLNYV 241

Query: 238 QP-VGDWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYG---GSTFWVGLQKVDGD 293
            P V D +L  +   +   + GS +AG ++N TYS   +A Y      T  +  QKV GD
Sbjct: 242 IPLVHDQSLALDGNLYRTLDTGSAKAGAINNTTYS--LAAAYSFLQAHTLTLSFQKVHGD 299

Query: 294 TWMRVNGT------SGGT---LANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNR 344
           T     GT       GG    LAN      F+   E+SW +R+D N  + GVPGL+ M R
Sbjct: 300 TPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGR 359

Query: 345 YISGRDV-------HSGGV----TDGKEWVRETELAYVIQSGAFKDLSVKWRNSSI--RR 391
           YI+G D+       HS        DG     + E  YVIQSG  K+LS++ R++ +    
Sbjct: 360 YINGSDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANA 419

Query: 392 DYSNNEFDENRLIFNYPLSLL 412
           D  + + +E RLI +YP +LL
Sbjct: 420 DQRDGDLNELRLIVDYPFTLL 440