Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  287 bits (735), Expect = 4e-82
 Identities = 170/427 (39%), Positives = 240/427 (56%), Gaps = 24/427 (5%)

Query: 5   HTLPFALLGAGVIAG-LPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQ 63
           +TL   L G G+++G L      A F++D KA L L+N+Y NR++   +  QSK EEW Q
Sbjct: 4   NTLNLILKGVGLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDAG-QSKREEWAQ 62

Query: 64  SFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPA---------D 114
            FIL+ +SGFTEG +GFGVDV+G+  +KLD      G+ LL R +D  P          D
Sbjct: 63  GFILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHD 122

Query: 115 DYGRLAVAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGG 174
           +Y +  V GK R +++EL+ G  +P LP L+ +  R  PQTFRG QVTS +IAGL L GG
Sbjct: 123 EYSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGG 182

Query: 175 QFRGNSPRNDASMEDM---SYGGGV-----SDRFNFVGGEYKFNQDRTQVGLWNAVLKDV 226
           Q      R     EDM   S  G       SDRF F GG+YK     T +    A L+D+
Sbjct: 183 QIDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMT-LSYHFAQLEDI 241

Query: 227 YQQQYLQLSHSQPVGDWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVG 286
           YQQ ++ L +S  +G  TL  ++ YF  D+ G+  AG++DN+  S      Y G +   G
Sbjct: 242 YQQHFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGG 301

Query: 287 LQKVDGDT-WMRVNGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRY 345
            Q+  GDT +  V+GT+   L ++   S+F   NER W  R+DF+F  +GVPGLT   R+
Sbjct: 302 YQEQYGDTPFTYVDGTN-TYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRW 360

Query: 346 ISGRDVH-SGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLI 404
             G      G   +G+EW R+ +L YV QSG  K +S++WRN   + +Y   + +ENR+I
Sbjct: 361 AKGDQAQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYL-RDMNENRVI 419

Query: 405 FNYPLSL 411
             Y ++L
Sbjct: 420 VGYTVAL 426